Welcome!

Postdoctoral Fellow

Bioinformatics Institite (A-STAR)

Biopolis, Singapore

Web: Bimolecular Modelling and Design Group

Phone: +65 6478 8353 (Office)
E-mail: suvrocu@yahoo.co.in , shubhragd@bii.a-star.edu.sg

Experience:

Postdoctoral Fellow (2007)

Department of BMB

University of Texas Medical Branch (UTMB)

Galveston, TX 77555, USA

Postdoctoral Researcher (2005-2006)  (Lab)

Genomecenter, UCDavis, California 95616, USA

Education:

Ph.D. (Chemistry) University of Calcutta, India

M.Sc. (Chemistry) University of Calcutta, India

B.Sc. (Chemistry) University of Calcutta, India

• simulation studies of p53 and its interaction with other proteins which regulate the p53 activity
• Drug design
• Study of Alzheimer Disease related protein/peptides
• Protein folding, unfolding, structure refinement
• Protein-protein and Protein-ligand interaction, docking
• Protein-solvent interaction
• Dynamics of lipid molecules in membranes.
• Bioinformatics

Publication:

1. G. Ping, S. G. Dastidar and Y. Duan, J. Chem. Phys. 126, 045108 (2007) , Statistical properties and kinetics of end-end contact formation of unfolded Polypeptides: A Systematic Molecular Dynamics Study 

2.  H. Lei, S. G. Dastidar and Y. Duan, J. Phys. Chem. B 110(43), 22001 (2006), Folding Transition state and Denatured state ensemble of FSD-1 from folding and unfolding simulation.

3. H. Liu, S.G. Dastidar, H. Lei, W. Zhang, M.C. Lee and Y. Duan. (2006) “ Protein Conformational changes in protein functions. ”, in Molecular Modeling of Proteins. Methods in Molecular Biology book series. Human Press Inc, In press 

4. S. G. Dastidar and C. Mukhopadhyay, Phys. Rev. E. 72, 051928 (2005), Unfolding dynamics of the protein ubiquitin: Insight from simulation

5. S. Mondal, S. G. Dastidar and C. Mukhopadhyay, J. Surface Sci. and Tech. 20,237 (2004), Effect of different local anesthetics on a phospholipid bilayer

6. S. G. Dastidar and C. Mukhopadhyay, Phys Rev. E 70, 061901 (2004), Anomalous behavior of water around sodium dodecyl sulphate micelles

7. S. G. Dastidar and C. Mukhopadhyay, Phys. Rev. E. 68, 021921 (2003), Structure, dynamics, and energetics of water at the surface of a small globular protein: A molecular dynamics simulation

Last Modified on Nov 30, 2007